한국과학기술원 (Korea Advanced Institute of Science and Technology, KAIST)
생명과학과

Recent papers

A novel splicing variant of DJ-1 in Parkinson's disease induces mitochondrial dysfunction
Heliyon 2023, 9 (3).
Clinical impact of clonal hematopoiesis on severe COVID-19 patients without canonical risk factors
Haematologica 2023, 108 (1), 257–260.
Systems Biology on Acetogenic Bacteria for Utilizing C1 Feedstocks
Advances in Biochemical Engineering/Biotechnology 2022, 180, 57–90.
Modifications of mRNA vaccine structural elements for improving mRNA stability and translation efficiency
Molecular and Cellular Toxicology 2022, 18 (1).
In vitro application of redesigned vacuole extracted in yeast
Molecular and Cellular Toxicology 2022.
Poly-3-hydroxybutyrate production in acetate minimal medium using engineered Methylorubrum extorquens AM1
Bioresource Technology 2022, 353.
Valorization of C1 gases to value-added chemicals using acetogenic biocatalysts
Chemical Engineering Journal 2022, 428.
Development of CO gas conversion system using high CO tolerance biocatalyst
Chemical Engineering Journal 2022, 449, 137678–0.
Functional role of a novel algicidal compound produced by Pseudoruegeria sp. M32A2M on the harmful algae Alexandrium catenella
Chemosphere 2022, 300.
Recent progress in the engineering of C1-utilizing microbes
Current Opinion in Biotechnology 2022, 78.
Adaptive laboratory evolution of Escherichia coli W enhances gamma-aminobutyric acid production using glycerol as the carbon source
Metabolic Engineering 2022, 69, 59–72.
Development of highly characterized genetic bioparts for efficient gene expression in CO 2 -fixing Eubacterium limosum
Metabolic Engineering 2022, 72, 215–226.
Novel Split Intein-Mediated Enzymatic Channeling Accelerates the Multimeric Bioconversion Pathway of Ginsenoside
ACS Synthetic Biology 2022, 11 (10), 3296–3304.
Comprehensive 16S rRNA and metagenomic data from the gut microbiome of aging and rejuvenation mouse models
Scientific Data 2022, 9 (1).
Comparative genomic analysis of Streptomyces rapamycinicus NRRL 5491 and its mutant overproducing rapamycin
Scientific Reports 2022, 12 (1).
ProChIPdb: A chromatin immunoprecipitation database for prokaryotic organisms
Nucleic Acids Research 2022, 50 (D1).
Synthetic 3'-UTR valves for optimal metabolic flux control in Escherichia coli
Nucleic Acids Research 2022, 50 (7), 4171–4186.
Genome-scale analysis of genetic regulatory elements in Streptomyces avermitilis MA-4680 using transcript boundary information
BMC Genomics 2022, 23 (1).
Structure based innovative approach to analyze aptaprobe–GPC3 complexes in hepatocellular carcinoma
Journal of Nanobiotechnology 2022, 20 (1).
A genome-scale metabolic model of Cupriavidus necator H16 integrated with TraDIS and transcriptomic data reveals metabolic insights for biotechnological applications
PLoS Computational Biology 2022, 18 (5).
System-Level Analysis of Transcriptional and Translational Regulatory Elements in Streptomyces griseus
Frontiers in Bioengineering and Biotechnology 2022, 10.
Engineering Acetogenic Bacteria for Efficient One-Carbon Utilization
Frontiers in Microbiology 2022, 13.
Semi-Biosynthetic Production of Surface-Binding Adhesive Antimicrobial Peptides Using Intein-Mediated Protein Ligation
International Journal of Molecular Sciences 2022, 23 (23).
Hi-C as a molecular rangefinder to examine genomic rearrangements
Seminars in Cell and Developmental Biology 2022, 121, 161–170.
PD-1 and TIGIT downregulation distinctly affect the effector and early memory phenotypes of CD19-targeting CAR T cells
Molecular Therapy 2022, 30 (2), 579–592.
Single-cell transcriptome analyses reveal distinct gene expression signatures of severe COVID-19 in the presence of clonal hematopoiesis
Experimental and Molecular Medicine 2022, 54 (10), 1756–1765.
Corrigendum to: CHD4 Conceals Aberrant CTCF-Binding Sites at TAD Interiors by Regulating Chromatin Accessibility in Mouse Embryonic Stem Cells (Mol. Cells 2021; 44(11): 805-829, 10.14348/molcells.2021
Molecules and cells 2022, 45 (7), 512–0.
Conversion of l-arabinose to l-ribose by genetically engineered Candida tropicalis
Bioprocess and Biosystems Engineering 2021, 44 (6), 1147–1154.
Photosynthetic production of biodiesel in Synechocystis sp. PCC6803 transformed with insect or plant fatty acid methyltransferase
Bioprocess and Biosystems Engineering 2021, 44 (7), 1433–1439.
Photosynthetic pigment production and metabolic and lipidomic alterations in the marine cyanobacteria Synechocystis sp. PCC 7338 under various salinity conditions
Journal of Applied Phycology 2021, 33 (1), 197–209.
The pine wood nematode Bursaphelenchus xylophilus and molecular diagnostic methods
Molecular and Cellular Toxicology 2021, 17 (1).
Mini review: Enzyme-based DNA synthesis and selective retrieval for data storage
Computational and Structural Biotechnology Journal 2021, 19, 2468–2476.
Biochemical characterization and molecular docking analysis of novel esterases from Sphingobium chungbukense DJ77
International Journal of Biological Macromolecules 2021, 168, 403–411.
Improved bio-hydrogen production by overexpression of glucose-6-phosphate dehydrogenase and FeFe hydrogenase in Clostridium acetobutylicum
International Journal of Hydrogen Energy 2021, 46 (74), 36687–36695.
Re-classification of Streptomyces venezuelae strains and mining secondary metabolite biosynthetic gene clusters
iScience 2021, 24 (12).
Microbial production of nematicidal agents for controlling plant-parasitic nematodes
Process Biochemistry 2021, 108, 69–79.
Integrating strategies for sustainable conversion of waste biomass into dark-fermentative hydrogen and value-added products
Renewable and Sustainable Energy Reviews 2021, 150.
Emerging applications of bacteria as antitumor agents
Seminars in Cancer Biology 2021.
Engineering Bacteroides thetaiotaomicron to produce non-native butyrate based on a genome-scale metabolic model-guided design
Metabolic Engineering 2021, 68, 174–186.
Transcriptome and translatome of CO 2 fixing acetogens under heterotrophic and autotrophic conditions
Scientific Data 2021, 8 (1).
Author Correction: Transcriptome and translatome profiles of Streptomyces species in different growth phases (Scientific Data, (2020), 7, 1, (138), 10.1038/s41597-020-0476-9)
Scientific Data 2021, 8 (1).
Systems and synthetic biology to elucidate secondary metabolite biosynthetic gene clusters encoded in: Streptomyces genomes
Natural Product Reports 2021, 38 (7), 1330–1361.
Acetogenic bacteria utilize light-driven electrons as an energy source for autotrophic growth
Proceedings of the National Academy of Sciences of 2021, 118 (9).
Discovery of novel secondary metabolites encoded in actinomycete genomes through coculture
Journal of Industrial Microbiology and Biotechnology 2021, 48 (3-4).
Unraveling the functions of uncharacterized transcription factors in Escherichia coli using ChIP-exo
Nucleic Acids Research 2021, 49 (17), 9696–9710.
Genome-scale analysis of acetobacterium woodii identifies translational regulation of acetogenesis
mSystems 2021, 6 (4).
Different Regulatory Modes of Synechocystis sp. PCC 6803 in Response to Photosynthesis Inhibitory Conditions
mSystems 2021, 6 (6).
Elucidating the regulatory elements for transcription termination and posttranscriptional processing in the streptomyces clavuligerus genome
mSystems 2021, 6 (3).
Ageing and rejuvenation models reveal changes in key microbial communities associated with healthy ageing
Microbiome 2021, 9 (1).
RiboRid: A low cost, advanced, and ultra-efficient method to remove ribosomal RNA for bacterial transcriptomics
PLoS Genetics 2021, 17 (9).
A multifaceted cellular damage repair and prevention pathway promotes high-level tolerance to β-lactam antibiotics
EMBO Reports 2021, 22 (2).
Streptomyces as Microbial Chassis for Heterologous Protein Expression
Frontiers in Bioengineering and Biotechnology 2021, 9.
Elucidation of the Algicidal Mechanism of the Marine Bacterium Pseudoruegeria sp. M32A2M Against the Harmful Alga Alexandrium catenella Based on Time-Course Transcriptome Analysis
Frontiers in Marine Science 2021, 8.
Multi-Omic Analyses Reveal Habitat Adaptation of Marine Cyanobacterium Synechocystis sp. PCC 7338
Frontiers in Microbiology 2021, 12.
Enhanced production of photosynthetic pigments and various metabolites and lipids in the cyanobacteria synechocystis sp. Pcc 7338 culture in the presence of exogenous glucose
Biomolecules 2021, 11 (2), 1–17.
Adhesive antimicrobial peptides containing 3,4-dihydroxy-l-phenylalanine residues for direct one-step surface coating
International Journal of Molecular Sciences 2021, 22 (21).
Assessment of erythrobacter species diversity through pan-genome analysis with newly isolated erythrobacter sp. 3-20a1m
Journal of Microbiology and Biotechnology 2021, 31 (4), 601–609.
covNorm: An R package for coverage based normalization of Hi-C and capture Hi-C data
Computational and Structural Biotechnology Journal 2021, 19, 3149–3159.
A compendium of chromatin contact maps reflecting regulation by chromatin remodelers in budding yeast
Nature Communications 2021, 12 (1).
3DIV update for 2021: A comprehensive resource of 3D genome and 3D cancer genome
Nucleic Acids Research 2021, 49 (D1).
Molecular laterality encodes stress susceptibility in the medial prefrontal cortex
Molecular Brain 2021, 14 (1).
Chd4 conceals aberrant ctcf-binding sites at tad interiors by regulating chromatin accessibility in mouse embryonic stem cells
Molecules and cells 2021, 44 (11), 805–829.
Functional annotation of lung cancer-associated genetic variants by cell type-specific epigenome and long-range chromatin interactome
Genomics and Informatics 2021, 19 (1).

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